GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-1126 |
Liver
|
PAXgene |
1
|
2 pieces; extensive panlobular macrovesicular steatosis; fibrous tissue on edge of 1 piece occupies 20% [outlined]
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
4 pieces; slight sloughing of surface on 2 pieces; slightly edematous stroma; abundant submucosal fibrous stroma, without glands
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-1326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscularis
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-1426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; 4 pieces well dissected muscularis, 2 have 20% fibrofatty adventitia with prominent nerves
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-1526 |
Stomach
|
PAXgene |
1
|
6 pieces; 5 of 6 have full thickness wall, 1 has no muscularis; submucosa edematous
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-1726 |
Ovary
|
PAXgene |
1
|
2 pieces; several large follicular cysts
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; several atrophic ducts in fibrofatty tissue
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; generally well dissected; 1 has 1mm fibrofatty adventitia
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-2526 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; well preserved cortex; 20 & 30% adherent fat
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-2626 |
Ileum
|
PAXgene |
1
|
6 pieces; lymphoid-rich mucosa on all pieces comprise 80% of area; glands partially sloughed
|
Acceptable
|
|
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, prominent Hashimoto thyroiditis with regressive changes; rep lymphoid aggregates delineated
|
Acceptable
|
|
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, target muscularis; no mucosa. Switch with -0525
|
Acceptable
|
|
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis. Adherent rim of serosa up to ~1.5mm
|
Acceptable
|
|
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-0926 |
Pancreas
|
PAXgene |
1
|
2 pieces, islets numerous and well-preserved, rep encircled, only trace fat
|
Acceptable
|
|
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-1226 |
Ileum
|
PAXgene |
1
|
5 pieces, target lymphoid aggregates well preserved, ~10-20% of tissue, rep delineated
|
Acceptable
|
|
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa well-fixed, partially stripped, 0.4mm, ~10-20% of thickness
|
Acceptable
|
|
GTEX-1QW4Y
|
21-40
|
Male
|
GTEX-1QW4Y-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, target muscularis is ~60% of tissue, sample with care
|
Acceptable
|
|
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-0426 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, few ~1mm colloid cysts
|
Acceptable
|
|
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-0726 |
Aorta
|
PAXgene |
1
|
6 pieces, trace atherosis
|
Acceptable
|
|
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-0826 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-0926 |
Heart
|
PAXgene |
1
|
2 pieces, minimal interstitial fibrosis
|
Acceptable
|
|
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-1026 |
Coronary artery
|
PAXgene |
1
|
2 pieces, adherent nubbins of fat up to ~1mm, delineated; mild atherosis, ~10-15% luminal occlusion
|
Acceptable
|
|
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-1126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, cortex, ~20% adherent/interstitial fat (rep delineated)
|
Acceptable
|
|
GTEX-1R46S
|
61-70
|
Female
|
GTEX-1R46S-1226 |
Lung
|
PAXgene |
1
|
2 pieces, moderate acute congestion, moderate diffuse acute pneumonitis/edema
|
Acceptable
|
|