GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-1126 |
Aorta
|
PAXgene |
1
|
6 pieces; atherosis layer up to 0.6mm and attached congested adventitia
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-1226 |
Coronary artery
|
PAXgene |
1
|
2 pieces; thick atherosclerotic intimal plaque with cholesterol clefts (arrow); ~25% luminal compromise; over 1mm attached adventitia with fat and nerves
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-1326 |
Liver
|
PAXgene |
1
|
2 pieces; marked congestion; mild to moderate fatty degeneration
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-1526 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; mild to moderate cortical autolysis; arterio and arteriolonephrosclerosis with hyalinized glomeruli (rep arrows); interstitial fibrosis with scarring and lymphocytic infiltrates; scattered ductal calcifications (outlined); congestion
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-1626 |
Omentum
|
PAXgene |
1
|
2 pieces (fragmented); lobulated mature adipose tissue with mesothelial outlines (rep arrowed);
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-1826 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis with rim of serosa
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; gynecomastoid ductal and stromal hyperplasia; ~50% adipose tissue
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces;15% and 5% fat mostly perivascular (outlined); couple of empty spaces (arrows)
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-2926 |
Brain - cortex
|
PAXgene |
1
|
4 fragmented pieces; tiny remnants of meninges with calcifications (outlined)
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-3026 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces; Purkinje cells present; tiny remnants of meninges (arrows)
|
Acceptable
|
|
GTEX-1QP6S
|
41-50
|
Male
|
GTEX-1QP6S-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece: 70% adenohypophysis and 30% neurohypophysis
|
Acceptable
|
|
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0126 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; no lesions; well dissected except for a 1mm fibrofatty focus on edge
|
Acceptable
|
|
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; 3 pieces have no mucosa, only muscularis propria, but with >90% striated muscle, not smooth muscle; 3 smaller pieces are largely fibrofatty
|
Unacceptable
|
|
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0426 |
Omentum
|
PAXgene |
1
|
2 pieces; 5 & 10% fibrous content
|
Acceptable
|
|
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0626 |
Stomach
|
PAXgene |
1
|
6 pieces; muscularis only, no mucosa
|
Unacceptable
|
|
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-0726 |
Ileum
|
PAXgene |
1
|
4 pieces; only 1 piece has lymphoid nodules; LCM
|
Unacceptable
|
|
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1026 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness with focal excess of fatty adventitia
|
Acceptable
|
|
GTEX-1QP9N
|
21-40
|
Male
|
GTEX-1QP9N-1326 |
Testis
|
PAXgene |
1
|
2 pieces; active spermatogenesis; no lesions
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-0226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; 10-20% dermal fat
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces plus fragments; 10% internal fat content
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; no lesions; generally well dissected; some tissue fractures
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-0926 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 10% internal fat
|
Acceptable
|
|
GTEX-1QPFJ
|
21-40
|
Female
|
GTEX-1QPFJ-1026 |
Heart
|
PAXgene |
1
|
2 pieces; artery bisects smaller piece (arrow); no lesions
|
Acceptable
|
|