GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; ~10% 'contaminant' squamous mucosa, rep delineated
|
Acceptable
|
|
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-2226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm, ~15-20% thickness
|
Acceptable
|
|
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-3126 |
Brain - cortex
|
PAXgene |
1
|
5 pieces, fragmented, no abnormalities
|
Acceptable
|
|
GTEX-1QMI2
|
61-70
|
Male
|
GTEX-1QMI2-3226 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces cerebellum (delineated), 2 pieces cortex
|
Unacceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, ~15-20% adherent fat/vascular elements, delineated; nodular goitre, regressive changes
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-0726 |
Aorta
|
PAXgene |
1
|
6 pieces, trace atherosis (up to ~0.2mm); adherent serosa up to ~1mm
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-0826 |
Spleen
|
PAXgene |
1
|
2 pieces, hilar vascular elements/fat up to ~10% of tissue, delineated
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-0926 |
Omentum
|
PAXgene |
1
|
2 pieces, mesothelial hyerplasia/vascular elements 5-10% of tissue, rep delineated.
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-1026 |
Pancreas
|
PAXgene |
1
|
2 pieces, mild saponification; islets well- preserved, moderate numbers, rep encircled
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-1426 |
Vagina
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.2mm
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-1526 |
Uterus
|
PAXgene |
1
|
2 pieces, myometrium only
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, few ~1mm nubbins of adherent cardiac mucosa
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-1726 |
Ileum
|
PAXgene |
1
|
6 pieces, target lymphoid aggregates up to ~40% of specimen
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-1826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.2mm, ~10% of thickness, prominent submucosal mucus gland present, rep delineated
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-1926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-2126 |
Stomach
|
PAXgene |
1
|
6 pieces, target mucosa up to 0.9m, ~10-20% thickness. Early surface sloughing
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis.
|
Acceptable
|
|
GTEX-1QP28
|
51-60
|
Female
|
GTEX-1QP28-2326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, target mucosa up to ~0.5mm, ~10% of thickness
|
Acceptable
|
|
GTEX-1QP29
|
51-60
|
Male
|
GTEX-1QP29-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion
|
Acceptable
|
|
GTEX-1QP29
|
51-60
|
Male
|
GTEX-1QP29-0226 |
Aorta
|
PAXgene |
1
|
6 pieces; atherosis (rep arrowed)
|
Acceptable
|
|
GTEX-1QP29
|
51-60
|
Male
|
GTEX-1QP29-0326 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; cortex and medulla and prominent vein (arrow); ~1mm rim of fat
|
Acceptable
|
|
GTEX-1QP29
|
51-60
|
Male
|
GTEX-1QP29-0426 |
Testis
|
PAXgene |
1
|
2 pieces; decreased spermatogenesis and predominance of Sertolii cells
|
Acceptable
|
|
GTEX-1QP29
|
51-60
|
Male
|
GTEX-1QP29-0526 |
Prostate
|
PAXgene |
1
|
2 pieces; mild to moderate autolysis; fibromuscular stroma and glandular component with focally sloughed epithelium
|
Acceptable
|
|
GTEX-1QP29
|
51-60
|
Male
|
GTEX-1QP29-0626 |
Skin, leg
|
PAXgene |
1
|
6 pieces; trace periadnexal fat; epidermis 36 micron thick; rare hair follicles (arrows)
|
Acceptable
|
|
GTEX-1QP29
|
51-60
|
Male
|
GTEX-1QP29-0726 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature adipose tissue, fibrovascular component and nerves (outlined)
|
Acceptable
|
|