GTEX-1QCLY
|
21-40
|
Male
|
GTEX-1QCLY-1326 |
Ileum
|
PAXgene |
1
|
6 pieces, mucosa and muscularis; no target lymphoid aggregates in mucosa
|
Unacceptable
|
|
GTEX-1QCLY
|
21-40
|
Male
|
GTEX-1QCLY-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; few adherent nubbins of serosal fat, delineated, ~1-2mm
|
Acceptable
|
|
GTEX-1QCLY
|
21-40
|
Male
|
GTEX-1QCLY-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.5mm, 20-50% thickness, submucosal mucus glands present, rep delineated.
|
Acceptable
|
|
GTEX-1QCLY
|
21-40
|
Male
|
GTEX-1QCLY-1826 |
Prostate
|
PAXgene |
1
|
2 pieces, hyperplastic glandular pattern
|
Acceptable
|
|
GTEX-1QCLY
|
21-40
|
Male
|
GTEX-1QCLY-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; adherent serosal fat up to ~2mm
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; from 10% to 50% internal/external fat; epidermis 35microns thick
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature adipose tissue and fibrovascular component
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; ~25% and 20% internal/external fat (outlined)
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; ~20% and 40% internal fat with fibrovascular component (outlined)
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; early atherosis; lumina open
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; one shows diffuse interstitial lymphoid infiltration with germinal centers; the second shows interstitial fibrosis with micro nodularity, variable size of follicles and interstitial lymphoid infiltrate; Hashimoto disease (lymphocytic thyroiditis)
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-0726 |
Aorta
|
PAXgene |
1
|
6 pieces; early atherosis and trace of adventitia
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-0826 |
Coronary artery
|
PAXgene |
1
|
2 pieces; early atherosis and up to 1.6mm attached adventitia and fat
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-0926 |
Heart
|
PAXgene |
1
|
2 pieces; subtle interstitial/perivascular connective tissue accentuation; well trimmed
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-1026 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-1126 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; one well trimmed fibromuscular tissue and other with ~15% internal/external fat
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-1226 |
Liver
|
PAXgene |
1
|
2 pieces; diffuse fatty degeneration (large and small fat droplets);one with bile ducts surrounded by dense fibrous tissue (outlined) and other covered by capsule at two sides (arrows)
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-1326 |
Pancreas
|
PAXgene |
1
|
6 pieces; well preserved pancreas with accentuation of Langerhans cells (rep outlined); 10% to 60% internal/external fat (outlined)
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-1426 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature adipose tissue and fibrovascular component
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; stratified squamous epithelium up to 0.27 mm
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis and fibrovascular tissue of submucosa (arrows)
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-1826 |
Stomach
|
PAXgene |
1
|
6 pieces; mild autolysis of mucosa and submucosa
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; mild to moderate autolysis of mucosa; outlined attached serosa and fat
|
Acceptable
|
|
GTEX-1QCLZ
|
61-70
|
Female
|
GTEX-1QCLZ-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; preserved target muscularis and not target moderaterly to severely autolyzed mucosa (outlined)
|
Acceptable
|
|