GTEX-1AX9J
|
61-70
|
Male
|
GTEX-1AX9J-2326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, focally well-fixed mucosa, 0.3-0.4mm
|
Acceptable
|
 |
GTEX-1AX9J
|
61-70
|
Male
|
GTEX-1AX9J-2426 |
Ileum
|
PAXgene |
1
|
6 pieces, not ileum, colonic mucosa, unknown origin
|
Unacceptable
|
 |
GTEX-1AX9J
|
61-70
|
Male
|
GTEX-1AX9J-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, target muscularis, adherent fibroadipose tissue on most sections, 1-2mm nubbins, rep. delineated
|
Acceptable
|
 |
GTEX-1AX9J
|
61-70
|
Male
|
GTEX-1AX9J-2626 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa 0.6-1.0mm, 30-40% of thickness. Some foci approach score 2 near luminal surface.
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-0126 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; 60% & 30% external untrimmed fat
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-0226 |
Spleen
|
PAXgene |
1
|
2 pieces; mildly congested, well preserved with well defined lymphoid tissue
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-0326 |
Coronary artery
|
PAXgene |
1
|
2 pieces; large [50%] intimal plaque in 1 piece, none in other; 60% is external fat
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-0426 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 5% & 10% internal fat
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-0526 |
Heart
|
PAXgene |
1
|
2 pieces; patchy hypereosinophilia; no scars
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; 10% external fat on 1 piece
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-0726 |
Aorta
|
PAXgene |
1
|
6 pieces; minimal plaque; up to 1 mm fatty adventitia
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-0826 |
Lung
|
PAXgene |
1
|
2 pieces; patchy areas of interstitial fibrosis
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-0926 |
Omentum
|
PAXgene |
1
|
2 pieces; 5% fibrous content in 1 piece
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well dissected muscle; well preserved ganglion cells
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; well preserved mucosa; 4 pieces contain submucosal mucous glands up to 10%
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscle
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces: 3 are all fat, 1 is 80% fat; virtually no mucosa; muscle is present on 2
|
Unacceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1426 |
Ileum
|
PAXgene |
1
|
6 pieces; 3 pieces have very good lymphoid tissue; all have muscularis propria; 3 have no mucosa; LCM
|
Unacceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1526 |
Prostate
|
PAXgene |
1
|
4 pieces; well preserved glands
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected muscle; a 0.7mm mucosal contaminant (carry-over) labeled
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1726 |
Stomach
|
PAXgene |
1
|
6 pieces; 3 have mucosa/submucosa only; 1 has muscularis only; 2 have full thickness (mucosa & muscularis)
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1826 |
Testis
|
PAXgene |
2
|
3 pieces; spermatogenesis with reduced number of mature sperm; colon mucosa/submucosa (4 sq mm, labeled) attached to 1 piece
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; scattered ducts (arrowed) in fibrofatty tissue
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-2026 |
Pancreas
|
PAXgene |
1
|
2 pieces; PanIN 1A lesions in 1 labeled focus. 5% internal fat
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-2126 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; 60% lip and fat on 1 piece, 10% on other (both labeled)
|
Acceptable
|
 |