GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-0926 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present
|
Acceptable
|
|
GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-1826 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa completely sloughed
|
Unacceptable
|
|
GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-1926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa up to 1mm but glandular elements completely sloughed
|
Acceptable
|
|
GTEX-1K2DU
|
21-40
|
Male
|
GTEX-1K2DU-2126 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced autolysis; insufficient target lymphoid aggregates present (<1%)
|
Unacceptable
|
|
GTEX-1K9T9
|
51-60
|
Female
|
GTEX-1K9T9-2326 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.6mm but with moderate to advanced auutolysis
|
Acceptable
|
|
GTEX-1K9T9
|
51-60
|
Female
|
GTEX-1K9T9-2826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.3mm, advanced autolysis, partially sloughed
|
Acceptable
|
|
GTEX-1KAFJ
|
51-60
|
Male
|
GTEX-1KAFJ-1126 |
Stomach
|
PAXgene |
3
|
6 pieces; autolyzed mucosa only, no muscularis
|
Unacceptable
|
|
GTEX-1KANB
|
51-60
|
Male
|
GTEX-1KANB-1426 |
Ileum
|
PAXgene |
3
|
5 pieces, target lymphoid aggregates are less than 1% of tissue
|
Unacceptable
|
|
GTEX-1KANB
|
51-60
|
Male
|
GTEX-1KANB-1526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target muscosa up to ~0.6mm, ~5-10% of thickness, glandular elements totally autolyzed
|
Acceptable
|
|
GTEX-1KANB
|
51-60
|
Male
|
GTEX-1KANB-1726 |
Stomach
|
PAXgene |
3
|
6 pieces, target mucosa completely sloughed; muscularis only
|
Unacceptable
|
|
GTEX-1KANB
|
51-60
|
Male
|
GTEX-1KANB-2626 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, cortex, advanced autolysis
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-1926 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces; tubules and ducts severely autolyzed; glomeruli somewhat better preserved; no sign of chronic or acute lesions
|
Acceptable
|
|
GTEX-1KD4Q
|
41-50
|
Male
|
GTEX-1KD4Q-2826 |
Stomach
|
PAXgene |
3
|
6 pieces; autolyzed mucosa without muscularis
|
Unacceptable
|
|
GTEX-1KD5A
|
51-60
|
Male
|
GTEX-1KD5A-2026 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed small intestine, but no significant lymphoid tissue.
|
Unacceptable
|
|
GTEX-1KD5A
|
51-60
|
Male
|
GTEX-1KD5A-2326 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; variable representation of muscularis and autolyzed colonic mucosa
|
Unacceptable
|
|
GTEX-1LC47
|
61-70
|
Male
|
GTEX-1LC47-1726 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, 3 with glomeruli (encircled) all with, advanced autolysis
|
Acceptable
|
|
GTEX-1LC47
|
61-70
|
Male
|
GTEX-1LC47-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.3mm, largely sloughed
|
Acceptable
|
|
GTEX-1LC47
|
61-70
|
Male
|
GTEX-1LC47-2426 |
Minor salivary glands
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.3mm, complete mucosal glandular autolysis/sloughing
|
Acceptable
|
|
GTEX-1LC47
|
61-70
|
Male
|
GTEX-1LC47-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced autolysis, less than 1% target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-1026 |
Pancreas
|
PAXgene |
3
|
2 pieces, advanced saponfication; islets completely degraded; ~20% adherent fat, rep. delineated.
|
Acceptable
|
|
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-1926 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa up to ~1mm, ~50% of thickness but with moderate-advanced autolysis, partially sloughed
|
Acceptable
|
|
GTEX-1LG7Y
|
51-60
|
Male
|
GTEX-1LG7Y-2026 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced autolysis, ~10% lymphoid aggregates, delineated
|
Acceptable
|
|
GTEX-1LH75
|
51-60
|
Female
|
GTEX-1LH75-1326 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, ~30% adherent fat; glomeruli present, advanced tubular autolysis
|
Acceptable
|
|
GTEX-1LH75
|
51-60
|
Female
|
GTEX-1LH75-1826 |
Stomach
|
PAXgene |
3
|
6 pieces; target mucosa up to ~0.6mm, advanced autolysis/sloughing
|
Acceptable
|
|
GTEX-1LH75
|
51-60
|
Female
|
GTEX-1LH75-1926 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced mucosal glandular autolysis; target lymphoid aggregates are ~10% of tissue, delineated
|
Acceptable
|
|