GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2726 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 8x3mm; subcutaneous adipose is up to 1 mm thick in 2 pieces
|
Acceptable
|
 |
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2826 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces, up to 6.5x2mm; mucosa (unwanted) and muscle (target) in all pieces
|
Acceptable
|
 |
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces ~6x3mm ~10% interstial fat aggregates up to ~1mm in dimension
|
Acceptable
|
 |
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-1726 |
Pancreas
|
PAXgene |
2
|
2 pieces, 8x8 & 8x7mm; ~20% peripheral adipose in 1 piece; islets not sclerosed or reduced in number
|
Acceptable
|
 |
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-1826 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 7x3mm; cortex with crystals in tubules; little sclerosis
|
Acceptable
|
 |
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-1526 |
Adipose tissue
|
PAXgene |
0
|
2 pieces ~12x5mm. "Contaminant' nerve vascular tissue in one up to ~2x1mm, delineated
|
Acceptable
|
 |
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-0526 |
Adipose tissue
|
PAXgene |
1
|
2 pieces ~10x7mm. Fibrous areas in both ~15% total area, delineated
|
Acceptable
|
 |
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-0626 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~4mm d. Nerve tissue delineated in both, up to 1.5mm discontinuous rim of adherent fat on both
|
Acceptable
|
 |
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-0726 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~4mm d. Moderate peripheral occlusive atherosclerosis ~30%,delineated Monckeberg's medial sclerosis in both
|
Acceptable
|
 |
GTEX-WRHU
|
51-60
|
Female
|
GTEX-WRHU-0926 |
Thyroid gland
|
PAXgene |
1
|
2 pieces ~8x7mm. Adherent fat/skeletal muscle/fibrous tissue in one, delineated. Multiple colloid cysts ~1mm, representative ones encircled
|
Acceptable
|
 |
GTEX-WRHU
|
51-60
|
Female
|
GTEX-WRHU-2926 |
Vagina
|
PAXgene |
1
|
6 pieces ~6x2.5mm 50% with squamous mucosa ~10-15% thickness. Focal mesonephric duct remnants in one aliquot, encircled
|
Acceptable
|
 |
GTEX-WWYW
|
51-60
|
Female
|
GTEX-WWYW-3226 |
Pituitary gland
|
PAXgene |
2
|
2 piece ~5x5 mm. Mixed adeno/neurohypophysis, mixed in dural elements (vessels)
|
Acceptable
|
 |
GTEX-WXYG
|
51-60
|
Female
|
GTEX-WXYG-0726 |
Lung
|
PAXgene |
1
|
2 pieces, 9x7 & 9x5mm; emphysematous changes, prominent bronchial mucosa in one, delineated; cartilage foci ensquared
|
Acceptable
|
 |
GTEX-WZTO
|
41-50
|
Male
|
GTEX-WZTO-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 4x3 & 3x2.5mm; up to ~30% atherosclerotic occlusion, delineated in both
|
Acceptable
|
 |
GTEX-WZTO
|
41-50
|
Male
|
GTEX-WZTO-2826 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, up to 5x3mm; ischemic changes in Purkinje cells
|
Acceptable
|
 |
GTEX-X15G
|
51-60
|
Female
|
GTEX-X15G-1726 |
Ovary
|
PAXgene |
1
|
2 pieces, 10.5x10 & 9x8mm; small (0.5--2mm) serous cystadenomas in one aliquot, delineated
|
Acceptable
|
 |
GTEX-X261
|
51-60
|
Male
|
GTEX-X261-2426 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces, up to 3x2mm; severe gland atrophy and duct dilatation in one, moderate in 2nd, 3rd piece OK; very good dissection
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, up to 9x5mm; good pure muscularis propria in all
|
Acceptable
|
 |
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, up to 8x3mm; good pure muscularis propria in all
|
Acceptable
|
 |
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-0426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 8x7 & 10x5.5mm; 10% central hole in one piece
|
Acceptable
|
 |
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-1626 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, up to 8x3mm; all muscle with 1 mm adipose in 1 piece
|
Acceptable
|
 |
GTEX-X4XX
|
61-70
|
Male
|
GTEX-X4XX-1326 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 8x3mm; Large calcified plaque in 1. Adventitial hemorrhage
|
Acceptable
|
 |
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2926 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, up to 6x3mm; subarachnoid hemorrhage in all (history of trauma).
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1026 |
Lung
|
PAXgene |
2
|
2 pieces, 9x7 & 8x7mm; Mucopurulent exudates in bronchi, but no pneumonia.
|
Acceptable
|
 |
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-1926 |
Pancreas
|
PAXgene |
2
|
2 pieces, 9x7 & 8x7mm; Several calcified small arteries. 10% internal adipose in one piece
|
Acceptable
|
 |