GTEx Histological Images

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Case ID	Age	Gender	Specimen ID	Tissue Type	Fixative	Autolysis	Pathology Review Comments	Acceptability	Action
GTEX-S7SE	51-60	Male	GTEX-S7SE-2326	Urinary bladder	PAXgene	3	6 pieces, ~10x2.5mm. Urothelium completely sloughed	Acceptable
GTEX-S7SF	21-40	Female	GTEX-S7SF-1126	Urinary bladder	PAXgene	2	6 pieces up to 10x5 mm; 3 have partially sloughed epithelium; 3 have only muscular wall	Acceptable
GTEX-S95S	51-60	Male	GTEX-S95S-0626	Urinary bladder	PAXgene	2	4 pieces, ~6x4mm, no visible urothelium; LDCC NOTE: 2 are ~50% fat, encircled	Acceptable
GTEX-SE5C	41-50	Female	GTEX-SE5C-1026	Urinary bladder	PAXgene	1	6 pieces up to 8x5 mm; only one piece has mucosa	Acceptable
GTEX-SIU7	51-60	Male	GTEX-SIU7-1026	Urinary bladder	PAXgene	1	6 pieces up to 9x4.8 mm; little mucosa sampled; mild chronic inflammation	Acceptable
GTEX-SIU8	51-60	Male	GTEX-SIU8-2126	Urinary bladder	PAXgene	3	6 pieces ~8x4mm, urothelium completely sloughed	Acceptable
GTEX-SJXC	61-70	Male	GTEX-SJXC-2126	Urinary bladder	PAXgene	3	6 pieces ~8x4mm; urothelium completely sloughed, half the pieces have layer of fat up to 50% of total thickness of specimen; representative fatty areas encircled	Acceptable
GTEX-SN8G	51-60	Female	GTEX-SN8G-2026	Urinary bladder	PAXgene	3	6 pieces ~8x3mm, urothelium completely sloughed	Acceptable
GTEX-SNMC	21-40	Male	GTEX-SNMC-0826	Urinary bladder	PAXgene	2	6 pieces up to 8x4 mm; mucosa is variably preserved: some areas well and some sloughed	Acceptable
GTEX-SNOS	41-50	Male	GTEX-SNOS-0526	Urinary bladder	PAXgene	1	6 pieces up to 10x5 mm; mucosa not in sections	Acceptable
GTEX-SUCS	61-70	Male	GTEX-SUCS-1226	Urinary bladder	PAXgene	2	6 pieces up to 8x5mm; little epithelium, what is present is largely sloughed; lots of tissue fractures	Acceptable
GTEX-T2IS	21-40	Female	GTEX-T2IS-2526	Urinary bladder	PAXgene	2	6 pieces ~8x2.5mm, urothelium completely sloughed	Acceptable
GTEX-T2YK	51-60	Male	GTEX-T2YK-2326	Urinary bladder	PAXgene	3	6 pieces up to 9x4 mm; all epithelium sloughed	Acceptable
GTEX-T5JC	21-40	Male	GTEX-T5JC-1126	Urinary bladder	PAXgene	3	6 pieces up to 7x4 mm; epithelium totally sloughed; muscle preserved; abundant adipose (up to 3 mm thick) on deep side	Acceptable
GTEX-T5JW	21-40	Female	GTEX-T5JW-0626	Urinary bladder	PAXgene	2	6 pieces, ~ 6x4mm, urothelium partly sloughed, <2% of thickness when present	Acceptable
GTEX-T5JW	21-40	Female	GTEX-T5JW-1026	Urinary bladder	PAXgene	2	6 pieces mucosa, ~ 6x3mm sloughed mucosa: not vagina but additional bladder. May be used as such when relabled	Acceptable
GTEX-T6MN	51-60	Male	GTEX-T6MN-2226	Urinary bladder	PAXgene	3	6 pieces up to 8x3 mm; epithelium sloughed; one piece 80% adipose	Acceptable
GTEX-T6MO	21-40	Female	GTEX-T6MO-0926	Urinary bladder	PAXgene	2	6 pieces ~10x5mm, urothelium largely sloughed, where present less than 1% of thickness	Acceptable
GTEX-TKQ1	21-40	Male	GTEX-TKQ1-0726	Urinary bladder	PAXgene	2	5 pieces fragmented, ~8x4mm. Urothelium partly sloughed but better preserved than typical, <1% of thickness	Acceptable
GTEX-TKQ2	41-50	Male	GTEX-TKQ2-0526	Urinary bladder	PAXgene	2	4 pieces ~5x3mm, 2 with partallly sloughed urothelium, where present <1% of thickness	Acceptable
GTEX-TML8	41-50	Female	GTEX-TML8-0626	Urinary bladder	PAXgene	1	6 pieces up to 7x5 mm; partly sloughed mucosa	Acceptable
GTEX-TMMY	41-50	Female	GTEX-TMMY-1526	Urinary bladder	PAXgene	2	6 pieces ~7x5mm. Urothelium partly sloughed but better preserved than usual	Acceptable
GTEX-TSE9	51-60	Female	GTEX-TSE9-2426	Urinary bladder	PAXgene	2	6 pieces up to 8x4 mm; mucosa totally sloughed; muscle adequate; some perimural adipose	Acceptable
GTEX-U3ZH	21-40	Male	GTEX-U3ZH-0826	Urinary bladder	PAXgene	3	6 pieces ~7x5mm. Urothelium largely sloughed; a few residual foci up to ~80 microns thick	Acceptable
GTEX-U3ZM	41-50	Male	GTEX-U3ZM-0826	Urinary bladder	PAXgene	2	6 pieces ~10x4mm. Urothelium variably sloughed, better preserved than usual, less than 1% of thickness	Acceptable

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