GTEX-1339X
|
41-50
|
Male
|
GTEX-1339X-0926 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; all pieces severely scarred with virtually no normal glomeruli, tubules or blood vessels; 'thyroidization'; severe vascular sclerosis; 4 pieces contain renal cell neoplasms up to 2 mm in diameter (annotated).
|
Unacceptable
|
 |
GTEX-1339X
|
41-50
|
Male
|
GTEX-1339X-1026 |
Pancreas
|
PAXgene |
1
|
2 pieces; islets greatly reduced in number
|
Acceptable
|
 |
GTEX-133LE
|
21-40
|
Female
|
GTEX-133LE-1126 |
Uterus
|
PAXgene |
0
|
2 pieces; myometrium only (in these cuts)
|
Acceptable
|
 |
GTEX-133LE
|
21-40
|
Female
|
GTEX-133LE-1426 |
Ileum
|
PAXgene |
1
|
5 pieces; several lymphoid nodules in 3 pieces; well dissected
|
Acceptable
|
 |
GTEX-133LE
|
21-40
|
Female
|
GTEX-133LE-1926 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; 20% fibrous content in 1, 5% in other
|
Acceptable
|
 |
GTEX-133LE
|
21-40
|
Female
|
GTEX-133LE-2026 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; 5% internal fat in 1 piece
|
Acceptable
|
 |
GTEX-133LE
|
21-40
|
Female
|
GTEX-133LE-2126 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 5% internal fat in 1 piece
|
Acceptable
|
 |
GTEX-1399Q
|
41-50
|
Male
|
GTEX-1399Q-2026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli present in all sections
|
Acceptable
|
 |
GTEX-1399R
|
21-40
|
Male
|
GTEX-1399R-1726 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 25% external fat in 1 piece
|
Acceptable
|
 |
GTEX-139D8
|
21-40
|
Female
|
GTEX-139D8-1926 |
Pancreas
|
PAXgene |
2
|
2 pieces; 30% internal and external fat; islets not reduced in number
|
Acceptable
|
 |
GTEX-139TS
|
61-70
|
Male
|
GTEX-139TS-0726 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; glomeruli in all sections, congestion, interstitial fibrosis and vascular thickening
|
Acceptable
|
 |
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; 50% of 1 is fibrous tissue; 1mm nerve in other
|
Acceptable
|
 |
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-0426 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; 1mm tendon in 1 piece; 10% internal fat in each piece
|
Acceptable
|
 |
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-1426 |
Omentum
|
PAXgene |
0
|
2 pieces; holes in tissue
|
Acceptable
|
 |
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-1926 |
Ileum
|
PAXgene |
2
|
6 pieces; 2 small lymphoid nodules [annotated] in autolyzed mucosa; muscularis (not target) in all; may be useful for LCM
|
Unacceptable
|
 |
GTEX-139TT
|
51-60
|
Male
|
GTEX-139TT-2326 |
Stomach
|
PAXgene |
2
|
6 pieces; superficial mucosal glands autolyzed, deep glands in better shape
|
Acceptable
|
 |
GTEX-139TU
|
61-70
|
Male
|
GTEX-139TU-1426 |
Omentum
|
PAXgene |
0
|
2 pieces; few central holes in one piece (?poor fixation)
|
Acceptable
|
 |
GTEX-139TU
|
61-70
|
Male
|
GTEX-139TU-1726 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; glomeruli in all sections, small portion of medulla also present, few sclerotic glomeruli, interstitial fibrosis and vascular thickening
|
Acceptable
|
 |
GTEX-139UW
|
61-70
|
Male
|
GTEX-139UW-0826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; 60% external fat in 1 piece, 30% in other
|
Acceptable
|
 |
GTEX-139UW
|
61-70
|
Male
|
GTEX-139UW-2126 |
Prostate
|
PAXgene |
1
|
2 pieces; glands (only in 1 piece and few) totally autolyzed; fibromuscular stroma preserved
|
Acceptable
|
 |
GTEX-139UW
|
61-70
|
Male
|
GTEX-139UW-2626 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; 10% internal fat in 1; 30% external fat in other piece
|
Acceptable
|
 |
GTEX-139YR
|
51-60
|
Male
|
GTEX-139YR-1126 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; central defect in one piece, about 15% is fibrous stroma with few ducts
|
Acceptable
|
 |
GTEX-139YR
|
51-60
|
Male
|
GTEX-139YR-1426 |
Testis
|
PAXgene |
1
|
2 pieces; thickened lamina propria, reduction in Leydig cells, abundant lipofuscin in Leydig cells, reduced spermatogenesis
|
Acceptable
|
 |
GTEX-139YR
|
51-60
|
Male
|
GTEX-139YR-2726 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; well trimmed, minute focus of calcification in one piece
|
Acceptable
|
 |
GTEX-13CIG
|
51-60
|
Male
|
GTEX-13CIG-2326 |
Ileum
|
PAXgene |
2
|
7 pieces; 2 small lymphoid nodules in 1 piece [annotated]; suitable for LCM studies; mucosa autolyzed, lymphoid tissue preserved
|
Acceptable
|
 |